Hmm - I'm not sure why the profile file would change unless it was being edited at the time (and not even then, really).
Is it still in this incorrect state?
If so, please attach the layouts.pt4 file from the "Data" folder in C:\Users\yourname\AppData\Local\PokerTracker 4 (which you can access from the PT4 File menu) to a
Support Ticket, preferably along with a version of the file with the "correct" profile. You may have a layouts.pt4.backup file with the right version.